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chore: stash
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@@ -7,16 +7,10 @@ from sqlalchemy.orm import Session
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from pkg.rag.knowledge.services.base_service import BaseService
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from pkg.rag.knowledge.services.database import Chunk, SessionLocal
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from pkg.rag.knowledge.services.chroma_manager import ChromaIndexManager
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from sqlalchemy.orm import declarative_base, sessionmaker
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from ....core import app
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from ....entity.persistence import model as persistence_model
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import sqlalchemy
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from ....provider.modelmgr.requester import RuntimeEmbeddingModel
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base = declarative_base()
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logger = logging.getLogger(__name__)
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class Embedder(BaseService):
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def __init__(self, ap: app.Application, chroma_manager: ChromaIndexManager = None) -> None:
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super().__init__()
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@@ -30,61 +24,66 @@ class Embedder(BaseService):
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This function assumes it's called within a context where the session
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will be committed/rolled back and closed by the caller.
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"""
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self.logger.debug(f"Saving {len(chunks_texts)} chunks for file_id {file_id} to DB (sync).")
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self.logger.debug(f'Saving {len(chunks_texts)} chunks for file_id {file_id} to DB (sync).')
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chunk_objects = []
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for text in chunks_texts:
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chunk = Chunk(file_id=file_id, text=text)
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session.add(chunk)
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chunk_objects.append(chunk)
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session.flush() # This populates the .id attribute for each new chunk object
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self.logger.debug(f"Successfully added {len(chunk_objects)} chunk entries to DB.")
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session.flush() # This populates the .id attribute for each new chunk object
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self.logger.debug(f'Successfully added {len(chunk_objects)} chunk entries to DB.')
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return chunk_objects
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async def embed_and_store(self, file_id: int, chunks: List[str], embedding_model: RuntimeEmbeddingModel) -> List[Chunk]:
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async def embed_and_store(
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self, file_id: int, chunks: List[str], embedding_model: RuntimeEmbeddingModel
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) -> List[Chunk]:
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if not embedding_model:
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raise RuntimeError("Embedding model not loaded. Please check Embedder initialization.")
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raise RuntimeError('Embedding model not loaded. Please check Embedder initialization.')
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session = SessionLocal() # Start a session that will live for the whole operation
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session = SessionLocal() # Start a session that will live for the whole operation
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chunk_objects = []
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try:
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# 1. Save chunks to the relational database first to get their IDs
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# We call _db_save_chunks_sync directly without _run_sync's session management
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# because we manage the session here across multiple async calls.
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chunk_objects = await asyncio.to_thread(self._db_save_chunks_sync, session, file_id, chunks)
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session.commit() # Commit chunks to make their IDs permanent and accessible
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session.commit() # Commit chunks to make their IDs permanent and accessible
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if not chunk_objects:
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self.logger.warning(f"No chunk objects created for file_id {file_id}. Skipping embedding and Chroma storage.")
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self.logger.warning(
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f'No chunk objects created for file_id {file_id}. Skipping embedding and Chroma storage.'
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)
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return []
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# get the embeddings for the chunks
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embeddings = []
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i = 0
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while i <len(chunks):
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chunk = chunks[i]
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embeddings: list[list[float]] = []
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for chunk in chunks:
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result = await embedding_model.requester.invoke_embedding(
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model=embedding_model,
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input_text=chunk,
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)
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embeddings.append(result)
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i += 1
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embeddings_np = np.array(embeddings, dtype=np.float32)
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self.logger.info("Saving embeddings to Chroma...")
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chunk_ids = [c.id for c in chunk_objects]
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self.logger.info('Saving embeddings to Chroma...')
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chunk_ids = [c.id for c in chunk_objects]
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file_ids_for_chroma = [file_id] * len(chunk_ids)
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await self._run_sync( # Use _run_sync for the Chroma operation, as it's a sync call
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await self._run_sync( # Use _run_sync for the Chroma operation, as it's a sync call
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self.chroma_manager.add_embeddings_sync,
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file_ids_for_chroma, chunk_ids, embeddings_np, chunks # Pass original chunks texts for documents
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file_ids_for_chroma,
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chunk_ids,
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embeddings_np,
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chunks, # Pass original chunks texts for documents
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)
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self.logger.info(f"Successfully saved {len(chunk_objects)} embeddings to Chroma.")
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self.logger.info(f'Successfully saved {len(chunk_objects)} embeddings to Chroma.')
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return chunk_objects
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except Exception as e:
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session.rollback() # Rollback on any error
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self.logger.error(f"Failed to process and store data for file_id {file_id}: {e}", exc_info=True)
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raise # Re-raise the exception to propagate it
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session.rollback() # Rollback on any error
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self.logger.error(f'Failed to process and store data for file_id {file_id}: {e}', exc_info=True)
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raise # Re-raise the exception to propagate it
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finally:
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session.close() # Ensure the session is always closed
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session.close() # Ensure the session is always closed
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